BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019B12LP1|AL427446
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1769 1892 0.0
>3x_Contig1769
Length = 25795
Score = 1892 bits (952), Expect = 0.0
Identities = 966/972 (99%), Gaps = 1/972 (0%)
Strand = Plus / Minus
Query: 1 gatcatctactgattgttggtatgaatcaccacgagctaagtgtggcctttcagagttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9774 gatcatctactgattgttggtatgaatcaccacgagctaagtgtggcctttcagagttat 9715
Query: 61 cattaatgatctcaccatacgagttccttatcactgaatggctggagtctgacgtaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9714 cattaatgatctcaccatacgagttccttatcactgaatggctggagtctgacgtaacac 9655
Query: 121 tagctcgtttctcggttttgtttgtcgatctggcccttgacttacctccgtcagttaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9654 tagctcgtttctcggttttgtttgtcgatctggcccttgacttacctccgtcagttaaat 9595
Query: 181 cgccagccgtaggagcmacaatgttatcgtcaattgggtcagtgctggtcacaagggaat 240
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9594 cgccagcggtaggagcaacaatgttatcgtcaattgggtcagtgctggtcacaagggaat 9535
Query: 241 ctacggtacctgaatgcactggcgaaattgagtaactgaaatcttgcgataaggagccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9534 ctacggtacctgaatgcactggcgaaattgagtaactgaaatcttgcgataaggagccac 9475
Query: 301 tcgaagaagacttctttgtcttttttttgttcttaatctttttcttattctccaaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9474 tcgaagaagacttctttgtcttttttttgttcttaatctttttcttattctccaaagatg 9415
Query: 361 atttcaattcactaatgtcatccaatcctttggcaattatgtcatctaaatctacatcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9414 atttcaattcactaatgtcatccaatcctttggcaattatgtcatctaaatctacatcct 9355
Query: 421 gatcatcggtcaaaagtgcgccttccttattcaattctgcaacagaagtgtattggtcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9354 gatcatcggtcaaaagtgcgccttccttattcaattctgcaacagaagtgtattggtcac 9295
Query: 481 tatcgtcaggagaagagtttttcaaattcaatctcctcacagattcattcagttggctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9294 tatcgtcaggagaagagtttttcaaattcaatctcctcacagattcattcagttggctga 9235
Query: 541 matcaggcattttttctggaacgaagtccggattctcactatcatcaatatcacggacag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9234 aatcaggcattttttctggaacgaagtccggattctcactatcatcaatatcacggacag 9175
Query: 601 aatgacccactaaactcggttgttcgctcataatccctgatttaaaaggatggtctaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9174 aatgacccactaaactcggttgttcgctcataatccctgatttaaaaggatggtctaata 9115
Query: 661 tttgcsagataattcgttaaaaaaacggaaatgactgcagagatttactgatctcagaag 720
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9114 tttgcgagataattcgttaaaaaaacggaaatgactgcagagatttactgatctcagaag 9055
Query: 721 atatattccagatcaattgtactttatcaacgacaccaatgaagaatttacaatatagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9054 atatattccagatcaattgtactttatcaacgacaccaatgaagaatttacaatatagtg 8995
Query: 781 aagacgtatatatatatagccagtatgacttattggaacaaaagtcccactttcttgaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8994 aagacgtatatatatatagccagtatgacttattggaacaaaagtcccactttcttgaaa 8935
Query: 841 tatgaggcaatcgatgaaaacctactaaattttaccctaatagagttttccgggtaatat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8934 tatgaggcaatcgatgaaaacctactaaattttaccctaatagagttttccgggtaatat 8875
Query: 901 gcctatttaatcttcagtcccgtttaagattgctagtagccaccggacagagagca-ttw 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8874 gcctatttaatcttcagtcccgtttaagattgctagtagccaccggacagagagcattta 8815
Query: 960 agttctatcagg 971
||||||||||||
Sbjct: 8814 agttctatcagg 8803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,048
Number of Sequences: 1807
Number of extensions: 10048
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)